PEACHi
GeneSet chr8q24 (Chromosomal_Bands.gmt.txt) is enriched in the following clusters
Cluster log(P) Qvalue Observed in Background Observed in Cluster Expected in Cluster
--- -2.6 0.02396 51.0 13.0 6.24
Gene expression pattern
Figure: Temporal expression patterns were grouped into clusters with differential expression profiles at three phases of the viral life cycle, namely reverse transcription, integration, and late phase. Boxplots on the left show the distribution of the normalized regression weights for each viral phase used in clustering. Expression change pattern of each gene over time is plotted for mock and HIV samples (dotted orange lines) along with the cluster median (bold red line).
List of genes
Ensembl ID Name Cluster
ENSG00000156802 ATAD2 NonAssociatedWithProgression
ENSG00000235173 C8orf30A ---
ENSG00000230567 C8orf30B ---
ENSG00000182307 C8orf33 NonAssociatedWithProgression
ENSG00000189376 C8orf76 o+o
ENSG00000104472 CHRAC1 NonAssociatedWithProgression
ENSG00000071894 CPSF1 o--a
ENSG00000179091 CYC1 ---
ENSG00000187954 CYHR1 ---
ENSG00000136986 DERL1 NonAssociatedWithProgression
ENSG00000185000 DGAT1 NonAssociatedWithProgression
ENSG00000104529 EEF1D o--a
ENSG00000123908 EIF2C2 o--b
ENSG00000178896 EXOSC4 --o
ENSG00000153310 FAM49B o+o
ENSG00000168672 FAM84B NonAssociatedWithProgression
ENSG00000176853 FAM91A1 o+o
ENSG00000156804 FBXO32 NonAssociatedWithProgression
ENSG00000250571 GLI4 o-+
ENSG00000104499 GML o++b
ENSG00000185803 GPR172A o--b
ENSG00000178719 GRINA --o
ENSG00000185122 HSF1 ---
ENSG00000234616 JRK NonAssociatedWithProgression
ENSG00000164961 KIAA0196 o++b
ENSG00000167702 KIFC2 o-+
ENSG00000160932 LY6E o--b
ENSG00000179632 MAF1 ---
ENSG00000136997 MYC o--b
ENSG00000104419 NDRG1 o--b
ENSG00000147684 NDUFB9 NonAssociatedWithProgression
ENSG00000160949 NFKBIL2 ---
ENSG00000156831 NSMCE2 +oo
ENSG00000129292 PHF20L1 o++b
ENSG00000249859 PVT1 o--a
ENSG00000164754 RAD21 o--b
ENSG00000160957 RECQL4 o--b
ENSG00000158106 RHPN1 o--a
ENSG00000170881 RNF139 o--b
ENSG00000161016 RPL8 ---
ENSG00000177570 SAMD12 o++a
ENSG00000179526 SHARPIN ---
ENSG00000147804 SLC39A4 ---
ENSG00000022567 SLC45A4 NonAssociatedWithProgression
ENSG00000104549 SQLE +oo
ENSG00000008513 ST3GAL1 +oo
ENSG00000064313 TAF2 o-o
ENSG00000147687 TATDN1 o+-
ENSG00000179886 TIGD5 ---
ENSG00000164983 TMEM65 NonAssociatedWithProgression
ENSG00000165071 TMEM71 NonAssociatedWithProgression
ENSG00000184428 TOP1MT o--a
ENSG00000183665 TRMT12 o--b
ENSG00000171045 TSNARE1 o-o
ENSG00000104522 TSTA3 NonAssociatedWithProgression
ENSG00000160948 VPS28 o-o
ENSG00000156787 WDR67 +o+
ENSG00000014164 ZC3H3 o--b
ENSG00000181638 ZFP41 ---
ENSG00000178764 ZHX2 NonAssociatedWithProgression
ENSG00000170631 ZNF16 NonAssociatedWithProgression
ENSG00000198169 ZNF251 ---
ENSG00000196378 ZNF34 -o-
ENSG00000180938 ZNF572 +o+
ENSG00000185730 ZNF696 +-o
ENSG00000147789 ZNF7 NonAssociatedWithProgression
ENSG00000181135 ZNF707 o--b