PEACHi
GeneSet RYTTCCTG_V$ETS2_B (TFmiRNA_Targets.gmt.txt) is enriched in the following clusters
Cluster log(P) Qvalue Observed in Background Observed in Cluster Expected in Cluster
AllGenesAssociatedWithProgression -4.7 0.00278 424.0 344.0 308.92
Gene expression pattern
Figure: Temporal expression patterns were grouped into clusters with differential expression profiles at three phases of the viral life cycle, namely reverse transcription, integration, and late phase. Boxplots on the left show the distribution of the normalized regression weights for each viral phase used in clustering. Expression change pattern of each gene over time is plotted for mock and HIV samples (dotted orange lines) along with the cluster median (bold red line).
List of genes
Ensembl ID Name Cluster
ENSG00000097007 ABL1 o--a
ENSG00000159842 ABR oo+
ENSG00000075624 ACTB o--b
ENSG00000072110 ACTN1 -+o
ENSG00000138071 ACTR2 o+o
ENSG00000137845 ADAM10 NonAssociatedWithProgression
ENSG00000143537 ADAM15 ---
ENSG00000204310 AGPAT1 o--b
ENSG00000146416 AIG1 --o
ENSG00000204673 AKT1S1 ---
ENSG00000123505 AMD1 o--a
ENSG00000159461 AMFR o-o
ENSG00000213983 AP1G2 ---
ENSG00000006125 AP2B1 ---
ENSG00000165272 AQP3 o--b
ENSG00000168374 ARF4 o+o
ENSG00000165527 ARF6 NonAssociatedWithProgression
ENSG00000124198 ARFGEF2 o+o
ENSG00000165322 ARHGAP12 o++b
ENSG00000075884 ARHGAP15 -+o
ENSG00000089820 ARHGAP4 ---
ENSG00000111348 ARHGDIB o--b
ENSG00000116584 ARHGEF2 o--b
ENSG00000163466 ARPC2 -o-
ENSG00000136950 ARPC5L o--b
ENSG00000141480 ARRB2 ---
ENSG00000116539 ASH1L o-o
ENSG00000074370 ATP2A3 o--b
ENSG00000058668 ATP2B4 o++b
ENSG00000143515 ATP8B2 o-+
ENSG00000076108 BAZ2A o++b
ENSG00000069399 BCL3 NonAssociatedWithProgression
ENSG00000113916 BCL6 +-o
ENSG00000186174 BCL9L o--b
ENSG00000136717 BIN1 --o
ENSG00000147439 BIN3 o--b
ENSG00000157764 BRAF oo-
ENSG00000158019 BRE o--a
ENSG00000156970 BUB1B +oo
ENSG00000156030 C14orf43 o--a
ENSG00000133466 C1QTNF6 +o+
ENSG00000132823 C20orf111 NonAssociatedWithProgression
ENSG00000101084 C20orf24 o+o
ENSG00000204564 C6orf136 -+o
ENSG00000204439 C6orf47 ---
ENSG00000198663 C6orf89 ---
ENSG00000143933 CALM2 o--a
ENSG00000179218 CALR ---
ENSG00000127022 CANX NonAssociatedWithProgression
ENSG00000131236 CAP1 o--a
ENSG00000116489 CAPZA1 NonAssociatedWithProgression
ENSG00000064012 CASP8 +-o
ENSG00000153113 CAST o+o
ENSG00000114423 CBLB +oo
ENSG00000198087 CD2AP NonAssociatedWithProgression
ENSG00000198851 CD3E o--a
ENSG00000010610 CD4 o--b
ENSG00000110448 CD5 o--a
ENSG00000013725 CD6 o--b
ENSG00000105369 CD79A ---
ENSG00000153283 CD96 o++a
ENSG00000105401 CDC37 ---
ENSG00000164885 CDK5 ---
ENSG00000124762 CDKN1A oo-
ENSG00000153046 CDYL o--a
ENSG00000173575 CHD2 o--b
ENSG00000109220 CHIC2 o++b
ENSG00000106069 CHN2 o++b
ENSG00000164442 CITED2 o++b
ENSG00000173207 CKS1B NonAssociatedWithProgression
ENSG00000157224 CLDN12 +o+
ENSG00000213719 CLIC1 o--b
ENSG00000141367 CLTC -o-
ENSG00000111726 CMAS o+o
ENSG00000064666 CNN2 o--b
ENSG00000138495 COX17 o+-
ENSG00000169372 CRADD o++b
ENSG00000107175 CREB3 NonAssociatedWithProgression
ENSG00000111269 CREBL2 o++b
ENSG00000095794 CREM o+o
ENSG00000167193 CRK o+o
ENSG00000102974 CTCF o--b
ENSG00000143387 CTSK oo+
ENSG00000154639 CXADR NonAssociatedWithProgression
ENSG00000114395 CYB561D2 o-o
ENSG00000068793 CYFIP1 o--a
ENSG00000132676 DAP3 o--a
ENSG00000156136 DCK ---
ENSG00000175203 DCTN2 --o
ENSG00000168209 DDIT4 o+-
ENSG00000023892 DEF6 o--a
ENSG00000065357 DGKA NonAssociatedWithProgression
ENSG00000149091 DGKZ --o
ENSG00000116133 DHCR24 NonAssociatedWithProgression
ENSG00000095059 DHPS o-o
ENSG00000109606 DHX15 +-o
ENSG00000067596 DHX8 o--a
ENSG00000150764 DIXDC1 NonAssociatedWithProgression
ENSG00000135164 DMTF1 NonAssociatedWithProgression
ENSG00000069345 DNAJA2 o-o
ENSG00000135392 DNAJC14 o++b
ENSG00000079805 DNM2 o--a
ENSG00000130816 DNMT1 o-o
ENSG00000115325 DOK1 o--a
ENSG00000178498 DTX3 o-o
ENSG00000120875 DUSP4 ---
ENSG00000112242 E2F3 NonAssociatedWithProgression
ENSG00000133740 E2F5 o--b
ENSG00000172889 EGFL7 ---
ENSG00000120738 EGR1 NonAssociatedWithProgression
ENSG00000178982 EIF3K o+o
ENSG00000132507 EIF5A o--a
ENSG00000158711 ELK4 NonAssociatedWithProgression
ENSG00000066322 ELOVL1 ---
ENSG00000135999 EPC2 oo-
ENSG00000177106 EPS8L2 --o
ENSG00000112851 ERBB2IP NonAssociatedWithProgression
ENSG00000105722 ERF ---
ENSG00000149564 ESAM +oo
ENSG00000173153 ESRRA ---
ENSG00000120705 ETF1 o--a
ENSG00000134954 ETS1 NonAssociatedWithProgression
ENSG00000244405 ETV5 +-o
ENSG00000139083 ETV6 o++a
ENSG00000196405 EVL NonAssociatedWithProgression
ENSG00000123737 EXOSC9 o--b
ENSG00000162694 EXTL2 NonAssociatedWithProgression
ENSG00000012232 EXTL3 o-o
ENSG00000118564 FBXL5 o-+
ENSG00000072803 FBXW11 o++b
ENSG00000090920 FCGBP o++a
ENSG00000130475 FCHO1 o--b
ENSG00000145780 FEM1C o-o
ENSG00000000938 FGR o--b
ENSG00000022267 FHL1 o++a
ENSG00000172500 FIBP --o
ENSG00000136068 FLNB NonAssociatedWithProgression
ENSG00000090554 FLT3LG +o+
ENSG00000184922 FMNL1 NonAssociatedWithProgression
ENSG00000114861 FOXP1 oo-
ENSG00000136877 FPGS o--a
ENSG00000167996 FTH1 oo-
ENSG00000140564 FURIN o++a
ENSG00000172728 FUT10 o++a
ENSG00000033327 GAB2 +o+
ENSG00000143641 GALNT2 o--a
ENSG00000007237 GAS7 ---
ENSG00000107485 GATA3 o+o
ENSG00000162676 GFI1 o-o
ENSG00000108262 GIT1 -o-
ENSG00000198814 GK -oo
ENSG00000100938 GMPR2 -+o
ENSG00000185838 GNB1L o--a
ENSG00000115806 GORASP2 ---
ENSG00000020181 GPR124 o++a
ENSG00000140030 GPR65 o++b
ENSG00000233276 GPX1 ---
ENSG00000154016 GRAP o--a
ENSG00000106070 GRB10 oo-
ENSG00000198873 GRK5 +oo
ENSG00000137947 GTF2B NonAssociatedWithProgression
ENSG00000163041 H3F3A NonAssociatedWithProgression
ENSG00000180353 HCLS1 o--a
ENSG00000126264 HCST o-+
ENSG00000010818 HIVEP2 NonAssociatedWithProgression
ENSG00000101294 HM13 o--b
ENSG00000064961 HMG20B o--a
ENSG00000137309 HMGA1 o--b
ENSG00000117318 ID3 ---
ENSG00000197081 IGF2R +-o
ENSG00000104365 IKBKB o++a
ENSG00000137070 IL11RA NonAssociatedWithProgression
ENSG00000110944 IL23A NonAssociatedWithProgression
ENSG00000168685 IL7R o++b
ENSG00000205339 IPO7 NonAssociatedWithProgression
ENSG00000198001 IRAK4 o--a
ENSG00000005844 ITGAL NonAssociatedWithProgression
ENSG00000150093 ITGB1 NonAssociatedWithProgression
ENSG00000150995 ITPR1 o++b
ENSG00000096433 ITPR3 o-o
ENSG00000171223 JUNB ---
ENSG00000069424 KCNAB2 ---
ENSG00000185760 KCNQ5 o++a
ENSG00000121210 KIAA0922 o-o
ENSG00000118922 KLF12 o+o
ENSG00000146021 KLHL3 o++b
ENSG00000139187 KLRG1 -+o
ENSG00000108424 KPNB1 o--a
ENSG00000100395 L3MBTL2 o--b
ENSG00000213658 LAT NonAssociatedWithProgression
ENSG00000182866 LCK o-o
ENSG00000136167 LCP1 o--b
ENSG00000182541 LIMK2 o--a
ENSG00000148943 LIN7C NonAssociatedWithProgression
ENSG00000143013 LMO4 -+o
ENSG00000139517 LNX2 NonAssociatedWithProgression
ENSG00000173621 LRFN4 ---
ENSG00000162337 LRP5 NonAssociatedWithProgression
ENSG00000137269 LRRC1 NonAssociatedWithProgression
ENSG00000227507 LTB -o-
ENSG00000168056 LTBP3 ---
ENSG00000003056 M6PR o-o
ENSG00000110514 MADD o--b
ENSG00000173327 MAP3K11 ---
ENSG00000104814 MAP4K1 NonAssociatedWithProgression
ENSG00000168067 MAP4K2 ---
ENSG00000071054 MAP4K4 +-o
ENSG00000112062 MAPK14 o++b
ENSG00000162889 MAPKAPK2 o--a
ENSG00000007047 MARK4 ---
ENSG00000152601 MBNL1 NonAssociatedWithProgression
ENSG00000171444 MCC +o+
ENSG00000232119 MCTS1 -+o
ENSG00000134138 MEIS2 o++b
ENSG00000071073 MGAT4A NonAssociatedWithProgression
ENSG00000133816 MICAL2 o++a
ENSG00000167548 MLL2 o-o
ENSG00000078403 MLLT10 o+o
ENSG00000108292 MLLT6 o--a
ENSG00000165943 MOAP1 NonAssociatedWithProgression
ENSG00000101928 MOSPD1 o+o
ENSG00000143314 MRPL24 o--b
ENSG00000147065 MSN NonAssociatedWithProgression
ENSG00000133026 MYH10 o--a
ENSG00000007944 MYLIP ---
ENSG00000197879 MYO1C ---
ENSG00000132780 NASP o--a
ENSG00000158092 NCK1 o+-
ENSG00000189043 NDUFA4 -+o
ENSG00000158864 NDUFS2 --o
ENSG00000069869 NEDD4 -+o
ENSG00000111859 NEDD9 NonAssociatedWithProgression
ENSG00000102908 NFAT5 o--b
ENSG00000162599 NFIA NonAssociatedWithProgression
ENSG00000109320 NFKB1 o++a
ENSG00000146232 NFKBIE o--b
ENSG00000087095 NLK oo+
ENSG00000170485 NPAS2 o-+
ENSG00000159899 NPR2 ---
ENSG00000160113 NR2F6 NonAssociatedWithProgression
ENSG00000076685 NT5C2 o--b
ENSG00000070882 OSBPL3 NonAssociatedWithProgression
ENSG00000007168 PAFAH1B1 o+-
ENSG00000090097 PCBP4 o-o
ENSG00000114209 PDCD10 NonAssociatedWithProgression
ENSG00000120913 PDLIM2 ---
ENSG00000152684 PELO o+o
ENSG00000179094 PER1 ---
ENSG00000079739 PGM1 --o
ENSG00000111752 PHC1 -oo
ENSG00000073921 PICALM +o+
ENSG00000171608 PIK3CD o++a
ENSG00000105851 PIK3CG o++b
ENSG00000145675 PIK3R1 o--a
ENSG00000196455 PIK3R4 NonAssociatedWithProgression
ENSG00000160447 PKN3 o-o
ENSG00000137841 PLCB2 o-+
ENSG00000107679 PLEKHA1 +o+
ENSG00000176903 PNMA1 +oo
ENSG00000175482 POLD4 --o
ENSG00000186184 POLR1D o--a
ENSG00000155846 PPARGC1B NonAssociatedWithProgression
ENSG00000108179 PPIF o+-
ENSG00000058272 PPP1R12A o+o
ENSG00000101445 PPP1R16B o++a
ENSG00000108819 PPP1R9B -+o
ENSG00000078304 PPP2R5C NonAssociatedWithProgression
ENSG00000072062 PRKACA ---
ENSG00000142875 PRKACB o--b
ENSG00000027075 PRKCH oo+
ENSG00000128563 PRKRIP1 o--b
ENSG00000197746 PSAP oo-
ENSG00000100911 PSME2 NonAssociatedWithProgression
ENSG00000171862 PTEN NonAssociatedWithProgression
ENSG00000112655 PTK7 o--a
ENSG00000179295 PTPN11 NonAssociatedWithProgression
ENSG00000143851 PTPN7 o--b
ENSG00000081237 PTPRC o+o
ENSG00000213402 PTPRCAP o-o
ENSG00000144724 PTPRG NonAssociatedWithProgression
ENSG00000134644 PUM1 o--a
ENSG00000185129 PURA ---
ENSG00000084733 RAB10 NonAssociatedWithProgression
ENSG00000103769 RAB11A -o-
ENSG00000185236 RAB11B ---
ENSG00000172780 RAB43 +o+
ENSG00000136238 RAC1 NonAssociatedWithProgression
ENSG00000160271 RALGDS o--a
ENSG00000123728 RAP2C o++b
ENSG00000155903 RASA2 o+o
ENSG00000185989 RASA3 o+-
ENSG00000111344 RASAL1 --o
ENSG00000068028 RASSF1 o--a
ENSG00000162521 RBBP4 NonAssociatedWithProgression
ENSG00000102054 RBBP7 o-o
ENSG00000171174 RBKS -oo
ENSG00000076067 RBMS2 NonAssociatedWithProgression
ENSG00000169220 RGS14 o--b
ENSG00000138835 RGS3 o++a
ENSG00000167550 RHEBL1 o--a
ENSG00000168421 RHOH o--b
ENSG00000104140 RHOV ---
ENSG00000167705 RILP oo+
ENSG00000100599 RIN3 o--a
ENSG00000134758 RNF138 o--b
ENSG00000092098 RNF31 o-o
ENSG00000103549 RNF40 o--a
ENSG00000069667 RORA NonAssociatedWithProgression
ENSG00000142676 RPL11 o--b
ENSG00000125691 RPL23 NonAssociatedWithProgression
ENSG00000008988 RPS20 o--a
ENSG00000177189 RPS6KA3 NonAssociatedWithProgression
ENSG00000162302 RPS6KA4 o--b
ENSG00000114993 RTKN NonAssociatedWithProgression
ENSG00000020633 RUNX3 o--b
ENSG00000175792 RUVBL1 ---
ENSG00000196876 SCN8A -+o
ENSG00000054282 SDCCAG8 ---
ENSG00000176986 SEC24C ---
ENSG00000058262 SEC61A1 ---
ENSG00000180096 SEPT1 ---
ENSG00000163536 SERPINI1 -+o
ENSG00000187231 SESTD1 o-+
ENSG00000168066 SF1 o-o
ENSG00000027869 SH2D2A o--b
ENSG00000131171 SH3BGRL o++b
ENSG00000100092 SH3BP1 --o
ENSG00000147010 SH3KBP1 +o+
ENSG00000125089 SH3TC1 o--b
ENSG00000160691 SHC1 o--a
ENSG00000185187 SIGIRR o--b
ENSG00000105281 SLC1A5 o--b
ENSG00000168575 SLC20A2 o--b
ENSG00000155287 SLC25A28 o--b
ENSG00000005022 SLC25A5 NonAssociatedWithProgression
ENSG00000104154 SLC30A4 -+o
ENSG00000162695 SLC30A7 o+o
ENSG00000181830 SLC35C1 ---
ENSG00000080189 SLC35C2 ---
ENSG00000139974 SLC38A6 NonAssociatedWithProgression
ENSG00000149150 SLC43A1 o--b
ENSG00000163798 SLC4A1AP o+o
ENSG00000164889 SLC4A2 -o-
ENSG00000109062 SLC9A3R1 o--a
ENSG00000181804 SLC9A9 o++b
ENSG00000166949 SMAD3 NonAssociatedWithProgression
ENSG00000157106 SMG1 o+o
ENSG00000197157 SND1 ---
ENSG00000157734 SNX22 NonAssociatedWithProgression
ENSG00000100485 SOS2 NonAssociatedWithProgression
ENSG00000167182 SP2 +oo
ENSG00000172845 SP3 NonAssociatedWithProgression
ENSG00000197694 SPTAN1 NonAssociatedWithProgression
ENSG00000182934 SRPR o--a
ENSG00000167720 SRR ---
ENSG00000141380 SS18 o++a
ENSG00000130511 SSBP4 o--b
ENSG00000141298 SSH2 NonAssociatedWithProgression
ENSG00000100380 ST13 -o-
ENSG00000007341 ST7L -oo
ENSG00000173757 STAT5B ---
ENSG00000101109 STK4 NonAssociatedWithProgression
ENSG00000165209 STRBP --o
ENSG00000115808 STRN o+o
ENSG00000135604 STX11 o++b
ENSG00000124222 STX16 o--a
ENSG00000157625 TAB3 o+o
ENSG00000148835 TAF5 o--a
ENSG00000158710 TAGLN2 o--b
ENSG00000140262 TCF12 o--a
ENSG00000029639 TFB1M o--b
ENSG00000068323 TFE3 o--a
ENSG00000163513 TGFBR2 +o+
ENSG00000118707 TGIF2 ---
ENSG00000151923 TIAL1 o+o
ENSG00000104980 TIMM44 ---
ENSG00000102265 TIMP1 o--a
ENSG00000137076 TLN1 NonAssociatedWithProgression
ENSG00000241697 TMEFF1 o+o
ENSG00000117586 TNFSF4 o++a
ENSG00000107854 TNKS2 o-+
ENSG00000198467 TPM2 ---
ENSG00000143549 TPM3 oo-
ENSG00000134900 TPP2 o+o
ENSG00000131323 TRAF3 -+o
ENSG00000124496 TRERF1 --o
ENSG00000213689 TREX1 o--b
ENSG00000173334 TRIB1 o--b
ENSG00000121060 TRIM25 NonAssociatedWithProgression
ENSG00000146063 TRIM41 +-o
ENSG00000125733 TRIP10 NonAssociatedWithProgression
ENSG00000100991 TRPC4AP +-o
ENSG00000119048 UBE2B o+-
ENSG00000170035 UBE2E3 NonAssociatedWithProgression
ENSG00000185651 UBE2L3 o--b
ENSG00000108312 UBTF o--a
ENSG00000140455 USP3 oo-
ENSG00000168899 VAMP5 --o
ENSG00000118640 VAMP8 NonAssociatedWithProgression
ENSG00000141968 VAV1 o--a
ENSG00000035403 VCL o++a
ENSG00000128564 VGF NonAssociatedWithProgression
ENSG00000166887 VPS39 NonAssociatedWithProgression
ENSG00000015285 WAS o--b
ENSG00000120008 WDR11 o+o
ENSG00000108379 WNT3 o+o
ENSG00000198373 WWP2 +-o
ENSG00000124571 XPO5 o+o
ENSG00000134684 YARS o--b
ENSG00000128245 YWHAH +-o
ENSG00000177485 ZBTB33 NonAssociatedWithProgression
ENSG00000213588 ZBTB9 o--a
ENSG00000147905 ZCCHC7 o--b
ENSG00000156599 ZDHHC5 o--b
ENSG00000186660 ZFP91 +-o
ENSG00000178764 ZHX2 NonAssociatedWithProgression
ENSG00000174306 ZHX3 ---
ENSG00000166478 ZNF143 o+o
ENSG00000010244 ZNF207 NonAssociatedWithProgression
ENSG00000179456 ZNF238 o-o
ENSG00000170265 ZNF282 o--b
ENSG00000119725 ZNF410 +o+
ENSG00000180938 ZNF572 +o+
ENSG00000180233 ZNRF2 o++b