PEACHi
GeneSet GGGYGTGNY_UNKNOWN (TFmiRNA_Targets.gmt.txt) is enriched in the following clusters
Cluster log(P) Qvalue Observed in Background Observed in Cluster Expected in Cluster
DownRegulated -3.7 0.02367 215.0 151.0 126.97
Gene expression pattern
Figure: Temporal expression patterns were grouped into clusters with differential expression profiles at three phases of the viral life cycle, namely reverse transcription, integration, and late phase. Boxplots on the left show the distribution of the normalized regression weights for each viral phase used in clustering. Expression change pattern of each gene over time is plotted for mock and HIV samples (dotted orange lines) along with the cluster median (bold red line).
List of genes
Ensembl ID Name Cluster
ENSG00000140526 ABHD2 o--a
ENSG00000136754 ABI1 NonAssociatedWithProgression
ENSG00000159842 ABR oo+
ENSG00000182827 ACBD3 NonAssociatedWithProgression
ENSG00000107897 ACBD5 o--b
ENSG00000075624 ACTB o--b
ENSG00000151694 ADAM17 +-o
ENSG00000123815 ADCK4 o--a
ENSG00000035687 ADSS NonAssociatedWithProgression
ENSG00000142208 AKT1 ---
ENSG00000126016 AMOT NonAssociatedWithProgression
ENSG00000182718 ANXA2 o++a
ENSG00000006125 AP2B1 ---
ENSG00000065000 AP3D1 o+o
ENSG00000221838 AP4M1 NonAssociatedWithProgression
ENSG00000166313 APBB1 o-o
ENSG00000084234 APLP2 o+o
ENSG00000122644 ARL4A NonAssociatedWithProgression
ENSG00000241685 ARPC1A o+o
ENSG00000170653 ATF7 ---
ENSG00000163399 ATP1A1 o--a
ENSG00000017260 ATP2C1 oo-
ENSG00000135390 ATP5G2 oo-
ENSG00000123191 ATP7B o++b
ENSG00000119986 AVPI1 o++a
ENSG00000118276 B4GALT6 NonAssociatedWithProgression
ENSG00000204469 BAT2 ---
ENSG00000119866 BCL11A ---
ENSG00000099968 BCL2L13 oo+
ENSG00000029363 BCLAF1 NonAssociatedWithProgression
ENSG00000074582 BCS1L o-o
ENSG00000105829 BET1 NonAssociatedWithProgression
ENSG00000204217 BMPR2 NonAssociatedWithProgression
ENSG00000141741 C17orf37 o-o
ENSG00000094975 C1orf9 NonAssociatedWithProgression
ENSG00000132823 C20orf111 NonAssociatedWithProgression
ENSG00000101220 C20orf27 o--a
ENSG00000124596 C6orf130 o-o
ENSG00000204564 C6orf136 -+o
ENSG00000143933 CALM2 o--a
ENSG00000004660 CAMKK1 ---
ENSG00000164615 CAMLG NonAssociatedWithProgression
ENSG00000108509 CAMTA2 --o
ENSG00000127022 CANX NonAssociatedWithProgression
ENSG00000131236 CAP1 o--a
ENSG00000153113 CAST o+o
ENSG00000136682 CBWD2 -+o
ENSG00000141570 CBX8 ---
ENSG00000118816 CCNI o--a
ENSG00000026508 CD44 o++b
ENSG00000164885 CDK5 ---
ENSG00000105810 CDK6 o--a
ENSG00000173575 CHD2 o--b
ENSG00000111642 CHD4 o--b
ENSG00000170175 CHRNB1 +o+
ENSG00000169504 CLIC4 +oo
ENSG00000148842 CNNM2 ---
ENSG00000204248 COL11A2 --o
ENSG00000119723 COQ6 o--a
ENSG00000110090 CPT1A --o
ENSG00000167193 CRK o+o
ENSG00000205758 CRYZL1 o++b
ENSG00000103653 CSK o--b
ENSG00000100592 DAAM1 o++b
ENSG00000155368 DBI NonAssociatedWithProgression
ENSG00000105516 DBP ---
ENSG00000172795 DCP2 o-o
ENSG00000175203 DCTN2 --o
ENSG00000168209 DDIT4 o+-
ENSG00000035499 DEPDC1B NonAssociatedWithProgression
ENSG00000149091 DGKZ --o
ENSG00000101452 DHX35 NonAssociatedWithProgression
ENSG00000184047 DIABLO o--a
ENSG00000132002 DNAJB1 NonAssociatedWithProgression
ENSG00000135392 DNAJC14 o++b
ENSG00000088387 DOCK9 o++a
ENSG00000167130 DOLPP1 NonAssociatedWithProgression
ENSG00000172269 DPAGT1 -+o
ENSG00000092964 DPYSL2 NonAssociatedWithProgression
ENSG00000135144 DTX1 o--b
ENSG00000143590 EFNA3 ---
ENSG00000092847 EIF2C1 -+o
ENSG00000105656 ELL o--a
ENSG00000125746 EML2 ---
ENSG00000095203 EPB41L4B -oo
ENSG00000182473 EXOC7 --o
ENSG00000185104 FAF1 o--a
ENSG00000116199 FAM20B o--b
ENSG00000182511 FES NonAssociatedWithProgression
ENSG00000102302 FGD1 NonAssociatedWithProgression
ENSG00000127418 FGFRL1 NonAssociatedWithProgression
ENSG00000022267 FHL1 o++a
ENSG00000088832 FKBP1A ---
ENSG00000196924 FLNA ---
ENSG00000136068 FLNB NonAssociatedWithProgression
ENSG00000125740 FOSB +-o
ENSG00000065970 FOXJ2 NonAssociatedWithProgression
ENSG00000089639 GMIP --o
ENSG00000114353 GNAI2 --o
ENSG00000066455 GOLGA5 -+o
ENSG00000213420 GPC2 o+-
ENSG00000173567 GPR113 o++b
ENSG00000167468 GPX4 o--b
ENSG00000198873 GRK5 +oo
ENSG00000198055 GRK6 ---
ENSG00000105723 GSK3A ---
ENSG00000049239 H6PD o-o
ENSG00000103145 HCFC1R1 o--a
ENSG00000158373 HIST1H2BD NonAssociatedWithProgression
ENSG00000112972 HMGCS1 oo-
ENSG00000118418 HMGN3 -+o
ENSG00000168172 HOOK3 o--b
ENSG00000182742 HOXB4 NonAssociatedWithProgression
ENSG00000204228 HSD17B8 o--b
ENSG00000140575 IQGAP1 NonAssociatedWithProgression
ENSG00000132470 ITGB4 ---
ENSG00000086544 ITPKC NonAssociatedWithProgression
ENSG00000205726 ITSN1 -+o
ENSG00000173801 JUP o-o
ENSG00000151079 KCNA6 NonAssociatedWithProgression
ENSG00000069424 KCNAB2 ---
ENSG00000102057 KCND1 ---
ENSG00000055118 KCNH2 -oo
ENSG00000136240 KDELR2 o--b
ENSG00000182149 KIAA0174 o-o
ENSG00000131149 KIAA0182 o--b
ENSG00000090889 KIF4A NonAssociatedWithProgression
ENSG00000169926 KLF13 oo-
ENSG00000102554 KLF5 o-+
ENSG00000186432 KPNA4 NonAssociatedWithProgression
ENSG00000108424 KPNB1 o--a
ENSG00000186395 KRT10 o--b
ENSG00000005893 LAMP2 o-+
ENSG00000167615 LENG8 o--a
ENSG00000213903 LTB4R ---
ENSG00000146963 LUC7L2 o--a
ENSG00000102316 MAGED2 ---
ENSG00000012983 MAP4K5 +o+
ENSG00000069956 MAPK6 o+-
ENSG00000166508 MCM7 o--b
ENSG00000110492 MDK NonAssociatedWithProgression
ENSG00000116604 MEF2D o--b
ENSG00000116688 MFN2 o--b
ENSG00000161013 MGAT4B ---
ENSG00000187098 MITF o--b
ENSG00000005483 MLL5 +oo
ENSG00000123562 MORF4L2 NonAssociatedWithProgression
ENSG00000106330 MOSPD3 o--a
ENSG00000155363 MOV10 ---
ENSG00000108852 MPP2 NonAssociatedWithProgression
ENSG00000175581 MRPL48 o--a
ENSG00000100330 MTMR3 NonAssociatedWithProgression
ENSG00000105887 MTPN NonAssociatedWithProgression
ENSG00000179820 MYADM oo-
ENSG00000125814 NAPB o++a
ENSG00000140396 NCOA2 NonAssociatedWithProgression
ENSG00000124151 NCOA3 o+o
ENSG00000104419 NDRG1 o--b
ENSG00000184613 NELL2 -oo
ENSG00000131196 NFATC1 o--b
ENSG00000077150 NFKB2 NonAssociatedWithProgression
ENSG00000001167 NFYA NonAssociatedWithProgression
ENSG00000123213 NLN NonAssociatedWithProgression
ENSG00000160113 NR2F6 NonAssociatedWithProgression
ENSG00000113580 NR3C1 o--a
ENSG00000104805 NUCB1 --o
ENSG00000102900 NUP93 o-o
ENSG00000182379 NXPH4 NonAssociatedWithProgression
ENSG00000147162 OGT o-o
ENSG00000175115 PACS1 ---
ENSG00000079462 PAFAH1B3 o--a
ENSG00000130669 PAK4 o--b
ENSG00000198807 PAX9 o++b
ENSG00000090097 PCBP4 o-o
ENSG00000196923 PDLIM7 -oo
ENSG00000179094 PER1 ---
ENSG00000112378 PERP +o+
ENSG00000112511 PHF1 o--b
ENSG00000043143 PHF15 o--b
ENSG00000143627 PKLR NonAssociatedWithProgression
ENSG00000102007 PLP2 o--a
ENSG00000120756 PLS1 o++a
ENSG00000130827 PLXNA3 +o+
ENSG00000113356 POLR3G -+o
ENSG00000110777 POU2AF1 oo+
ENSG00000058272 PPP1R12A o+o
ENSG00000113575 PPP2CA o--b
ENSG00000221823 PPP3R1 +oo
ENSG00000148840 PPRC1 o--b
ENSG00000181929 PRKAG1 ---
ENSG00000105227 PRX NonAssociatedWithProgression
ENSG00000173692 PSMD1 NonAssociatedWithProgression
ENSG00000120899 PTK2B NonAssociatedWithProgression
ENSG00000112655 PTK7 o--a
ENSG00000104960 PTOV1 o-o
ENSG00000084733 RAB10 NonAssociatedWithProgression
ENSG00000185236 RAB11B ---
ENSG00000167461 RAB8A +-o
ENSG00000166128 RAB8B o++b
ENSG00000177548 RABEP2 o--a
ENSG00000017797 RALBP1 --o
ENSG00000116191 RALGPS2 oo+
ENSG00000123728 RAP2C o++b
ENSG00000108352 RAPGEFL1 o--a
ENSG00000102054 RBBP7 o-o
ENSG00000185272 RBM11 NonAssociatedWithProgression
ENSG00000239306 RBM14 o--a
ENSG00000102317 RBM3 -o-
ENSG00000167771 RCOR2 NonAssociatedWithProgression
ENSG00000072042 RDH11 o--a
ENSG00000169220 RGS14 o--b
ENSG00000138835 RGS3 o++a
ENSG00000119729 RHOQ o+o
ENSG00000157450 RNF111 o++b
ENSG00000069667 RORA NonAssociatedWithProgression
ENSG00000177189 RPS6KA3 NonAssociatedWithProgression
ENSG00000100784 RPS6KA5 NonAssociatedWithProgression
ENSG00000114993 RTKN NonAssociatedWithProgression
ENSG00000040608 RTN4R ---
ENSG00000163602 RYBP -o-
ENSG00000136715 SAP130 o--b
ENSG00000004139 SARM1 o-o
ENSG00000102098 SCML2 NonAssociatedWithProgression
ENSG00000196876 SCN8A -+o
ENSG00000163904 SENP2 o--a
ENSG00000161956 SENP3 o--b
ENSG00000163535 SGOL2 NonAssociatedWithProgression
ENSG00000197860 SGTB o--b
ENSG00000095370 SH2D3C NonAssociatedWithProgression
ENSG00000147010 SH3KBP1 +o+
ENSG00000115840 SLC25A12 o++a
ENSG00000155287 SLC25A28 o--b
ENSG00000121073 SLC35B1 o-o
ENSG00000134294 SLC38A2 oo-
ENSG00000149150 SLC43A1 o--b
ENSG00000164889 SLC4A2 -o-
ENSG00000139514 SLC7A1 +-o
ENSG00000101187 SLCO4A1 NonAssociatedWithProgression
ENSG00000099956 SMARCB1 ---
ENSG00000177427 SMCR7 ---
ENSG00000135632 SMYD5 ---
ENSG00000205302 SNX2 --o
ENSG00000107742 SPOCK2 +o+
ENSG00000163486 SRGAP2 NonAssociatedWithProgression
ENSG00000173465 SSSCA1 NonAssociatedWithProgression
ENSG00000101972 STAG2 o--b
ENSG00000066923 STAG3 o--b
ENSG00000166888 STAT6 o--b
ENSG00000117632 STMN1 o--b
ENSG00000076944 STXBP2 o--b
ENSG00000101945 SUV39H1 o--a
ENSG00000131018 SYNE1 o++b
ENSG00000090447 TFAP4 o--b
ENSG00000068323 TFE3 o--a
ENSG00000126351 THRA --o
ENSG00000078804 TP53INP2 NonAssociatedWithProgression
ENSG00000124496 TRERF1 --o
ENSG00000071575 TRIB2 NonAssociatedWithProgression
ENSG00000132481 TRIM47 NonAssociatedWithProgression
ENSG00000187688 TRPV2 -o-
ENSG00000100271 TTLL1 ---
ENSG00000198431 TXNRD1 o+o
ENSG00000092445 TYRO3 o-+
ENSG00000122042 UBL3 NonAssociatedWithProgression
ENSG00000118939 UCHL3 NonAssociatedWithProgression
ENSG00000101557 USP14 o--b
ENSG00000135655 USP15 NonAssociatedWithProgression
ENSG00000253797 UTP14C NonAssociatedWithProgression
ENSG00000220205 VAMP2 o--b
ENSG00000108828 VAT1 o--b
ENSG00000144560 VGLL4 o--a
ENSG00000026025 VIM o--b
ENSG00000100568 VTI1B --o
ENSG00000158195 WASF2 NonAssociatedWithProgression
ENSG00000071127 WDR1 NonAssociatedWithProgression
ENSG00000140153 WDR20 +oo
ENSG00000119333 WDR34 o--b
ENSG00000166483 WEE1 NonAssociatedWithProgression
ENSG00000108379 WNT3 o+o
ENSG00000082898 XPO1 o-o
ENSG00000130227 XPO7 o--b
ENSG00000128245 YWHAH +-o
ENSG00000164924 YWHAZ o--b
ENSG00000213588 ZBTB9 o--a
ENSG00000005889 ZFX o--b
ENSG00000067646 ZFY NonAssociatedWithProgression
ENSG00000198026 ZNF335 NonAssociatedWithProgression
ENSG00000165244 ZNF367 NonAssociatedWithProgression