PEACHi
GeneSet Pre-NOTCH Expression and Processing (Pathways_-_Reactome.gmt.txt) is enriched in the following clusters
Cluster log(P) Qvalue Observed in Background Observed in Cluster Expected in Cluster
AllGenesAssociatedWithProgression -1.7976931348623157E308 0.0 24.0 24.0 17.49
Gene expression pattern
Figure: Temporal expression patterns were grouped into clusters with differential expression profiles at three phases of the viral life cycle, namely reverse transcription, integration, and late phase. Boxplots on the left show the distribution of the normalized regression weights for each viral phase used in clustering. Expression change pattern of each gene over time is plotted for mock and HIV samples (dotted orange lines) along with the cluster median (bold red line).
List of genes
Ensembl ID Name Cluster
ENSG00000174437 ATP2A2 -o-
ENSG00000074370 ATP2A3 o--b
ENSG00000086062 B4GALT1 ---
ENSG00000092847 EIF2C1 -+o
ENSG00000123908 EIF2C2 o--b
ENSG00000126070 EIF2C3 o+o
ENSG00000134698 EIF2C4 +o+
ENSG00000140564 FURIN o++a
ENSG00000100060 MFNG o--a
ENSG00000155363 MOV10 ---
ENSG00000148400 NOTCH1 o+o
ENSG00000134250 NOTCH2 o-o
ENSG00000074181 NOTCH3 o--b
ENSG00000101346 POFUT1 -oo
ENSG00000163389 POGLUT1 o++a
ENSG00000175582 RAB6A o++b
ENSG00000169733 RFNG o--a
ENSG00000126091 ST3GAL3 --o
ENSG00000110080 ST3GAL4 o-o
ENSG00000064225 ST3GAL6 o++a
ENSG00000086598 TMED2 +o+
ENSG00000090905 TNRC6A +-o
ENSG00000100354 TNRC6B o+o
ENSG00000141510 TP53 o--a