PEACHi
GeneSet PHOSPHOPROTEIN_PHOSPHATASE_ACTIVITY (GO_-_Molecular_Function.gmt.txt) is enriched in the following clusters
Cluster log(P) Qvalue Observed in Background Observed in Cluster Expected in Cluster
+oo -3.2 0.03238 38.0 4.0 0.71
Gene expression pattern
Figure: Temporal expression patterns were grouped into clusters with differential expression profiles at three phases of the viral life cycle, namely reverse transcription, integration, and late phase. Boxplots on the left show the distribution of the normalized regression weights for each viral phase used in clustering. Expression change pattern of each gene over time is plotted for mock and HIV samples (dotted orange lines) along with the cluster median (bold red line).
List of genes
Ensembl ID Name Cluster
ENSG00000101224 CDC25B o--a
ENSG00000100526 CDKN3 NonAssociatedWithProgression
ENSG00000060069 CTDP1 ---
ENSG00000172115 CYCS o--b
ENSG00000075711 DLG1 NonAssociatedWithProgression
ENSG00000120129 DUSP1 o--a
ENSG00000144048 DUSP11 o--b
ENSG00000081721 DUSP12 NonAssociatedWithProgression
ENSG00000158050 DUSP2 o--b
ENSG00000108861 DUSP3 o-+
ENSG00000120875 DUSP4 ---
ENSG00000138166 DUSP5 +-o
ENSG00000139318 DUSP6 NonAssociatedWithProgression
ENSG00000164086 DUSP7 o--a
ENSG00000184545 DUSP8 ---
ENSG00000112425 EPM2A +oo
ENSG00000182866 LCK o-o
ENSG00000100330 MTMR3 NonAssociatedWithProgression
ENSG00000162407 PPAP2B NonAssociatedWithProgression
ENSG00000086717 PPEF1 +o+
ENSG00000100614 PPM1A o--a
ENSG00000138032 PPM1B o-o
ENSG00000115241 PPM1G o--a
ENSG00000164088 PPM1M ---
ENSG00000172531 PPP1CA o--a
ENSG00000104695 PPP2CB +o+
ENSG00000221914 PPP2R2A o--b
ENSG00000167393 PPP2R3B o--a
ENSG00000011485 PPP5C o--a
ENSG00000119414 PPP6C o--b
ENSG00000171862 PTEN NonAssociatedWithProgression
ENSG00000184007 PTP4A2 o--a
ENSG00000165996 PTPLA +o+
ENSG00000196396 PTPN1 +oo
ENSG00000179295 PTPN11 NonAssociatedWithProgression
ENSG00000127947 PTPN12 +oo
ENSG00000175354 PTPN2 NonAssociatedWithProgression
ENSG00000134242 PTPN22 o++b
ENSG00000070159 PTPN3 NonAssociatedWithProgression
ENSG00000088179 PTPN4 o++b
ENSG00000143851 PTPN7 o--b
ENSG00000132670 PTPRA o--a
ENSG00000081237 PTPRC o+o
ENSG00000153707 PTPRD NonAssociatedWithProgression
ENSG00000132334 PTPRE +oo
ENSG00000142949 PTPRF ---
ENSG00000144724 PTPRG NonAssociatedWithProgression
ENSG00000152894 PTPRK NonAssociatedWithProgression
ENSG00000173482 PTPRM NonAssociatedWithProgression
ENSG00000155093 PTPRN2 -+o
ENSG00000100241 SBF1 ---
ENSG00000105197 TIMM50 ---