GeneSet Retrograde neurotrophin signalling (Pathways_-_Reactome.gmt.txt) is enriched in the following clusters
Cluster log(P) Qvalue Observed in Background Observed in Cluster Expected in Cluster
AllGenesAssociatedWithProgression -1.7976931348623157E308 0.0 10.0 10.0 7.29
Gene expression pattern
Figure: Temporal expression patterns were grouped into clusters with differential expression profiles at three phases of the viral life cycle, namely reverse transcription, integration, and late phase. Boxplots on the left show the distribution of the normalized regression weights for each viral phase used in clustering. Expression change pattern of each gene over time is plotted for mock and HIV samples (dotted orange lines) along with the cluster median (bold red line).
List of genes
Ensembl ID Name Cluster
ENSG00000196961 AP2A1 ---
ENSG00000006125 AP2B1 ---
ENSG00000161203 AP2M1 ---
ENSG00000042753 AP2S1 o--b
ENSG00000122705 CLTA +-o
ENSG00000141367 CLTC -o-
ENSG00000100246 DNAL4 o-o
ENSG00000106976 DNM1 --o
ENSG00000079805 DNM2 o--a
ENSG00000197959 DNM3 o++b