PEACHi
GeneSet V$TAXCREB_02 (TFmiRNA_Targets.gmt.txt) is enriched in the following clusters
Cluster log(P) Qvalue Observed in Background Observed in Cluster Expected in Cluster
DownRegulated -1.7976931348623157E308 0.0 10.0 10.0 5.91
Gene expression pattern
Figure: Temporal expression patterns were grouped into clusters with differential expression profiles at three phases of the viral life cycle, namely reverse transcription, integration, and late phase. Boxplots on the left show the distribution of the normalized regression weights for each viral phase used in clustering. Expression change pattern of each gene over time is plotted for mock and HIV samples (dotted orange lines) along with the cluster median (bold red line).
List of genes
Ensembl ID Name Cluster
ENSG00000006831 ADIPOR2 oo-
ENSG00000166233 ARIH1 o--a
ENSG00000119866 BCL11A ---
ENSG00000131504 DIAPH1 o--b
ENSG00000156508 EEF1A1 o--a
ENSG00000142227 EMP3 o--b
ENSG00000204619 PPP1R11 o--b
ENSG00000108352 RAPGEFL1 o--a
ENSG00000197747 S100A10 NonAssociatedWithProgression
ENSG00000197019 SERTAD1 ---
ENSG00000157216 SSBP3 o--a
ENSG00000117758 STX12 NonAssociatedWithProgression