GeneSet DNA_DAMAGE_RESPONSESIGNAL_TRANSDUCTION_RESULTING_IN_INDUCTION_OF_APOPTOSIS (GO_-_Biological_Process.gmt.txt) is enriched in the following clusters
Cluster log(P) Qvalue Observed in Background Observed in Cluster Expected in Cluster
DownRegulated -1.7976931348623157E308 0.0 8.0 8.0 4.72
Gene expression pattern
Figure: Temporal expression patterns were grouped into clusters with differential expression profiles at three phases of the viral life cycle, namely reverse transcription, integration, and late phase. Boxplots on the left show the distribution of the normalized regression weights for each viral phase used in clustering. Expression change pattern of each gene over time is plotted for mock and HIV samples (dotted orange lines) along with the cluster median (bold red line).
List of genes
Ensembl ID Name Cluster
ENSG00000097007 ABL1 o--a
ENSG00000156709 AIFM1 NonAssociatedWithProgression
ENSG00000069399 BCL3 NonAssociatedWithProgression
ENSG00000012048 BRCA1 NonAssociatedWithProgression
ENSG00000089486 C16orf5 o--b
ENSG00000183765 CHEK2 ---
ENSG00000127334 DYRK2 o--b
ENSG00000163565 IFI16 o--a
ENSG00000090097 PCBP4 o-o
ENSG00000140464 PML o-o
ENSG00000141510 TP53 o--a